RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

spf - pspG.qor.IGR interactions in library 'Exponential Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
spf pspG.qor.IGR sRNA IGR chr + 4049898 4049957 chr + 4263187 4263247 206 22.5
pspG.qor.IGR spf IGR sRNA chr + 4263157 4263213 chr + 4049923 4050007 80 7.2

spf reads

pspG.qor.IGR reads