RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

nlpD - mgrR interactions in library 'Stationary Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
nlpD mgrR CDS sRNA chr - 2867683 2868131 chr - 1622817 1622889 4720 19.3
mgrR nlpD sRNA CDS chr - 1622855 1622915 chr - 2867587 2867771 187 1.8

nlpD reads

mgrR reads