RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

sodB.5UTR - ryhB interactions in library 'Iron Limitation':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
sodB.5UTR ryhB 5UTR sRNA chr + 1735325 1735363 chr - 3580924 3580991 38 4.1
ryhB sodB.5UTR sRNA 5UTR chr - 3580981 3581018 chr + 1735350 1735474 71 15.0

sodB.5UTR reads

ryhB reads