RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

oppA - arcZ interactions in library 'Stationary Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
oppA arcZ CDS sRNA chr + 1302387 1302463 chr + 3350662 3350698 233 26.8
oppA arcZ CDS sRNA chr + 1300977 1301274 chr + 3350611 3350698 576 1.9
oppA arcZ CDS sRNA chr + 1301578 1301935 chr + 3350614 3350698 196 1.7
oppA arcZ CDS sRNA chr + 1302279 1302372 chr + 3350678 3350698 32 3.9

oppA reads

arcZ reads