RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

oppA - gcvB interactions in library 'Stationary Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
oppA gcvB CDS sRNA chr + 1301077 1301273 chr + 2942718 2942902 339 2.5
gcvB oppA sRNA CDS chr + 2942694 2942861 chr + 1301177 1301276 714 8.6

oppA reads

gcvB reads