RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

ompC - malG.3UTR interactions in library 'Stationary Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
ompC malG.3UTR CDS 3UTR chr - 2312280 2312778 chr - 4242529 4242767 76 3.5
ompC malG.3UTR CDS 3UTR chr - 2311852 2312278 chr - 4242531 4242673 36 5.2

ompC reads

malG.3UTR reads