RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

lpp - cpxP.3UTR interactions in library 'Stationary Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
lpp cpxP.3UTR CDS 3UTR chr + 1757383 1757466 chr + 4106378 4106387 143 3.6
lpp cpxP.3UTR CDS 3UTR chr + 1757383 1757628 chr + 4106313 4106370 236 17.7

lpp reads

cpxP.3UTR reads