RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

lpd - spf interactions in library 'Iron Limitation':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
spf lpd sRNA CDS chr + 4049898 4049945 chr + 127915 128070 84 22.5
lpd spf CDS sRNA chr + 127934 127983 chr + 4049980 4050006 18 10.8

lpd reads

spf reads