RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

lpd - spf interactions in library 'Exponential Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
spf lpd sRNA CDS chr + 4049898 4049944 chr + 128004 128095 39 16.4
lpd spf CDS sRNA chr + 127901 127993 chr + 4049939 4050006 16 7.6

lpd reads

spf reads