RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

opgC.EST3UTR

Summary:

Name ID Genomic annotation Chromosome Strand
opgC.EST3UTR G6552.EST3UTR 3UTR chr -

Library breakdown:

Library # of unique Interactions # of chimeric fragments Fraction as 2nd SIC score Longest U-tract
Exp. Phase (Melamed et al. 2016) 1 35 1.00 0.00 6
Iron Limitation (Melamed et al. 2016) 1 10 1.00 0.00 6

Interaction table:

Name Genomic annotation Exponential Phase Iron Limitation
nagE CDS Show interaction
tdcC CDS Show interaction