RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

cusC.cusF.IGT_AS

Flanking gene IDs:

  • G6320
  • G6321

Summary:

Name ID Genomic annotation Chromosome Strand
cusC.cusF.IGT_AS G6320.G6321.IGT_AS AS chr -

Library breakdown:

Library # of unique Interactions # of chimeric fragments Fraction as 2nd SIC score Longest U-tract
Exp. Phase (Melamed et al. 2016) 1 23 1.00 0.00 2
Iron Limitation (Melamed et al. 2016) 1 17 0.00 -1.00 2

Interaction table:

Name Genomic annotation Exponential Phase Iron Limitation
narK CDS Show interaction
narK.narG.IGR IGR Show interaction