RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

ispU.5UTR

Summary:

Name ID Genomic annotation Chromosome Strand
ispU.5UTR G6092.5UTR 5UTR chr +

Library breakdown:

Library # of unique Interactions # of chimeric fragments Fraction as 2nd SIC score Longest U-tract
Exp. Phase (Melamed et al. 2016) 1 17 0.00 -1.00 8
Iron Limitation (Melamed et al. 2016) 1 11 1.00 0.00 8

Interaction table:

Name Genomic annotation Exponential Phase Iron Limitation
ompT CDS Show interaction
oxyS sRNA Show interaction