RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

acpP

Summary:

Name ID Genomic annotation Chromosome Strand
acpP EG50003 CDS chr +

Library breakdown:

Library # of unique Interactions # of chimeric fragments Fraction as 2nd SIC score Longest U-tract
Exp. Phase (Melamed et al. 2016) 1 290 1.00 0.00 5
Stat. Phase (Melamed et al. 2016) 1 464 1.00 0.00 5
Iron Limitation (Melamed et al. 2016) 1 547 1.00 0.00 5

Interaction table:

Name Genomic annotation Exponential Phase Stationary Phase Iron Limitation
micL sRNA Show interaction Show interaction Show interaction