RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

glk.3UTR

Summary:

Name ID Genomic annotation Chromosome Strand
glk.3UTR EG12957.3UTR 3UTR chr -

Library breakdown:

Library # of unique Interactions # of chimeric fragments Fraction as 2nd SIC score Longest U-tract
Exp. Phase (Melamed et al. 2016) 1 21 1.00 0.00 5
Stat. Phase (Melamed et al. 2016) 1 15 1.00 0.00 5
Iron Limitation (Melamed et al. 2016) 1 16 1.00 0.00 5

Interaction table:

Name Genomic annotation Exponential Phase Stationary Phase Iron Limitation
ompA.5UTR 5UTR Show interaction Show interaction Show interaction