RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

wbbK.insH-7.IGR

Flanking gene IDs:

  • EG11985
  • G7092

Summary:

Name ID Genomic annotation Chromosome Strand
wbbK.insH-7.IGR EG11985.G7092.IGR IGR chr -

Library breakdown:

Library # of unique Interactions # of chimeric fragments Fraction as 2nd SIC score Longest U-tract
Exp. Phase (Melamed et al. 2016) 1 12 1.00 0.00 5
Stat. Phase (Melamed et al. 2016) 1 20 0.00 -1.00 3

Interaction table:

Name Genomic annotation Exponential Phase Stationary Phase
cpxP.3UTR 3UTR Show interaction
insH-7.gnd.IGR IGR Show interaction