RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

ftsN

Summary:

Name ID Genomic annotation Chromosome Strand
ftsN EG11529 CDS chr -

Library breakdown:

Library # of unique Interactions # of chimeric fragments Fraction as 2nd SIC score Longest U-tract
Exp. Phase (Melamed et al. 2016) 1 12 0.00 -1.00 3
Stat. Phase (Melamed et al. 2016) 1 10 0.00 -1.00 2
Iron Limitation (Melamed et al. 2016) 2 35 0.00 -0.50 3

Interaction table:

Name Genomic annotation Exponential Phase Stationary Phase Iron Limitation
cytR CDS Show interaction
dicF sRNA Show interaction Show interaction Show interaction