RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

ilvB.ivbL.IGT

Flanking gene IDs:

  • EG10494
  • EG11275

Summary:

Name ID Genomic annotation Chromosome Strand
ilvB.ivbL.IGT EG10494.EG11275.IGT IGT chr -

Library breakdown:

Library # of unique Interactions # of chimeric fragments Fraction as 2nd SIC score Longest U-tract
Exp. Phase (Melamed et al. 2016) 1 559 1.00 0.00 5
Stat. Phase (Melamed et al. 2016) 1 177 1.00 0.00 5

Interaction table:

Name Genomic annotation Exponential Phase Stationary Phase
gcvB sRNA Show interaction Show interaction