RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

ftsI

Summary:

Name ID Genomic annotation Chromosome Strand
ftsI EG10341 CDS chr +

Library breakdown:

Library # of unique Interactions # of chimeric fragments Fraction as 2nd SIC score Longest U-tract
Exp. Phase (Melamed et al. 2016) 1 96 1.00 0.00 4
Stat. Phase (Melamed et al. 2016) 1 342 1.00 0.00 4
Iron Limitation (Melamed et al. 2016) 1 367 1.00 0.00 4

Interaction table:

Name Genomic annotation Exponential Phase Stationary Phase Iron Limitation
rybB sRNA Show interaction Show interaction Show interaction