RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

fhuF.EST3UTR - gcvB interactions in library 'Iron Limitation':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
gcvB fhuF.EST3UTR sRNA 3UTR chr + 2942695 2942770 chr - 4604705 4604775 77 2.5
fhuF.EST3UTR gcvB 3UTR sRNA chr - 4604778 4604877 chr + 2942715 2942860 396 10.2

fhuF.EST3UTR reads

gcvB reads