RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

nanC.5UTR - spf interactions in library 'Exponential Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
spf nanC.5UTR sRNA 5UTR chr + 4049898 4049959 chr - 4539502 4539648 205 14.0
nanC.5UTR spf 5UTR sRNA chr - 4539508 4539656 chr + 4049923 4050009 82 5.1

nanC.5UTR reads

spf reads