RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

cpxP.3UTR - entS interactions in library 'Iron Limitation':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
entS cpxP.3UTR CDS 3UTR chr + 622600 622677 chr + 4106367 4106387 41 108.7
entS cpxP.3UTR CDS 3UTR chr + 622694 622957 chr + 4106347 4106387 14 12.3

cpxP.3UTR reads

entS reads