RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

cpxP.3UTR - putP interactions in library 'Stationary Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
putP cpxP.3UTR CDS 3UTR chr + 1079282 1079375 chr + 4106325 4106387 92 9.3
putP cpxP.3UTR CDS 3UTR chr + 1080291 1080674 chr + 4106353 4106387 30 4.6

cpxP.3UTR reads

putP reads