RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

cpxP.3UTR - glpK interactions in library 'Exponential Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
glpK cpxP.3UTR CDS 3UTR chr - 4116278 4116374 chr + 4106357 4106387 69 30.5
glpK cpxP.3UTR CDS 3UTR chr - 4116391 4116535 chr + 4106356 4106387 43 3.9

cpxP.3UTR reads

glpK reads