RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

ysgA.5UTR - gcvB interactions in library 'Iron Limitation':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
ysgA.5UTR gcvB 5UTR sRNA chr - 4016181 4016197 chr + 2942788 2942878 331 6.0
ysgA.5UTR gcvB 5UTR sRNA chr - 4016180 4016195 chr + 2942717 2942776 66 2.4

ysgA.5UTR reads

gcvB reads