RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

tsaC - fnrS interactions in library 'Exponential Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
tsaC fnrS CDS sRNA chr - 3430981 3431161 chr + 1409181 1409250 160 4.0
fnrS tsaC sRNA CDS chr + 1409127 1409176 chr - 3431293 3431378 159 1.6

tsaC reads

fnrS reads