RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

glcD.5UTR - gcvB interactions in library 'Stationary Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
glcD.5UTR gcvB 5UTR sRNA chr - 3128001 3128087 chr + 2942717 2942868 42 6.3
gcvB glcD.5UTR sRNA 5UTR chr + 2942695 2942861 chr - 3127981 3128041 130 15.7

glcD.5UTR reads

gcvB reads