RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

rppH - cyaR interactions in library 'Stationary Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
rppH cyaR CDS sRNA chr - 2968587 2968778 chr + 2167146 2167201 436 7.4
rppH cyaR CDS sRNA chr - 2968780 2968872 chr + 2167149 2167200 114 2.0

rppH reads

cyaR reads