RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

pmrD - gcvB interactions in library 'Iron Limitation':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
pmrD gcvB CDS sRNA chr - 2373381 2373563 chr + 2942717 2942845 77 2.5
gcvB pmrD sRNA CDS chr + 2942695 2942775 chr - 2373213 2373537 68 2.8

pmrD reads

gcvB reads