RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

ydiK - mgrR interactions in library 'Iron Limitation':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
ydiK mgrR CDS sRNA chr + 1769085 1769188 chr - 1622820 1622837 20 16.2
mgrR ydiK sRNA CDS chr - 1622859 1622915 chr + 1769206 1769231 15 31.9

ydiK reads

mgrR reads