RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

dtpA - gcvB interactions in library 'Iron Limitation':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
gcvB dtpA sRNA CDS chr + 2942695 2942771 chr + 1712781 1712875 158 8.6
dtpA gcvB CDS sRNA chr + 1712682 1712876 chr + 2942715 2942877 182 4.8

dtpA reads

gcvB reads