RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

gadC - arcZ interactions in library 'Stationary Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
gadC arcZ CDS sRNA chr - 1570389 1570473 chr + 3350665 3350698 63 19.8
arcZ gadC sRNA CDS chr + 3350641 3350666 chr - 1570368 1570432 22 7.4

gadC reads

arcZ reads