RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

yncE.5UTR - ryhB interactions in library 'Iron Limitation':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
yncE.5UTR ryhB 5UTR sRNA chr + 1523220 1523675 chr - 3580741 3580999 4086 7.2
ryhB yncE.5UTR sRNA 5UTR chr - 3580978 3581018 chr + 1523248 1523362 304 2.1

yncE.5UTR reads

ryhB reads