RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

fiu - gcvB interactions in library 'Iron Limitation':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
fiu gcvB CDS sRNA chr - 841400 841577 chr + 2942716 2942777 194 1.8
fiu gcvB CDS sRNA chr - 840589 840656 chr + 2942742 2942872 54 2.8

fiu reads

gcvB reads