RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

sgrS - ptsG.5UTR interactions in library 'Exponential Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
sgrS ptsG.5UTR sRNA 5UTR chr + 77366 77553 chr + 1157829 1157868 113 232.0
ptsG.5UTR sgrS 5UTR sRNA chr + 1157766 1157872 chr + 77397 77594 168 249.4

sgrS reads

ptsG.5UTR reads