RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

ypfM - arcZ interactions in library 'Stationary Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
ypfM arcZ CDS sRNA chr - 2590752 2591045 chr + 3350662 3350698 1107 28.8
arcZ ypfM sRNA CDS chr + 3350641 3350664 chr - 2590781 2590844 106 12.0

ypfM reads

arcZ reads