RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

ypfM - arcZ interactions in library 'Exponential Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
ypfM arcZ CDS sRNA chr - 2590760 2590971 chr + 3350608 3350698 1946 6.2
arcZ ypfM sRNA CDS chr + 3350576 3350666 chr - 2590756 2590873 883 5.9

ypfM reads

arcZ reads