RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

omrB - csgD.5UTR interactions in library 'Stationary Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
omrB csgD.5UTR sRNA 5UTR chr - 2976379 2976386 chr - 1103219 1103298 70 33.3
omrB csgD.5UTR sRNA 5UTR chr - 2976183 2976376 chr - 1103195 1103267 31 4.9

omrB reads

csgD.5UTR reads