RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

cyaR - rfbA interactions in library 'Iron Limitation':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
rfbA cyaR CDS sRNA chr - 2110978 2111033 chr + 2167136 2167201 177 45.2
cyaR rfbA sRNA CDS chr + 2167112 2167165 chr - 2110948 2110972 45 18.1

cyaR reads

rfbA reads