RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

cyaR - rfbA interactions in library 'Stationary Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
rfbA cyaR CDS sRNA chr - 2110977 2111073 chr + 2167147 2167201 132 9.8
cyaR rfbA sRNA CDS chr + 2167113 2167170 chr - 2110947 2110974 78 8.9

cyaR reads

rfbA reads