RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

cyaR - rfbA interactions in library 'Exponential Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
rfbA cyaR CDS sRNA chr - 2110980 2111052 chr + 2167135 2167201 162 27.8
cyaR rfbA sRNA CDS chr + 2167113 2167165 chr - 2110956 2110972 53 12.0

cyaR reads

rfbA reads