RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

cyaR - gpmA interactions in library 'Iron Limitation':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
gpmA cyaR CDS sRNA chr - 787480 787632 chr + 2167136 2167201 485 5.3
gpmA cyaR CDS sRNA chr - 787279 787471 chr + 2167141 2167201 167 1.7

cyaR reads

gpmA reads