RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

cyaR - rbsC interactions in library 'Iron Limitation':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
rbsC cyaR CDS sRNA chr + 3935779 3936256 chr + 2167136 2167201 439 7.5
rbsC cyaR CDS sRNA chr + 3935714 3935767 chr + 2167162 2167200 21 9.1

cyaR reads

rbsC reads