RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

cyaR - glpB interactions in library 'Iron Limitation':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
glpB cyaR CDS sRNA chr + 2355202 2355277 chr + 2167156 2167200 39 3.6
glpB cyaR CDS sRNA chr + 2354290 2354358 chr + 2167143 2167200 52 2.6

cyaR reads

glpB reads