RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

ryhB - erpA interactions in library 'Iron Limitation':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
ryhB erpA sRNA CDS chr - 3580984 3581018 chr + 176613 176699 73 13.8
erpA ryhB CDS sRNA chr + 176415 176895 chr - 3580922 3580992 142 4.1

ryhB reads

erpA reads