RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

ryhB - sdhC interactions in library 'Iron Limitation':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
sdhC ryhB CDS sRNA chr + 755480 755568 chr - 3580922 3580995 239 24.7
sdhC ryhB CDS sRNA chr + 755080 755477 chr - 3580922 3580992 122 3.5
ryhB sdhC sRNA CDS chr - 3580987 3581019 chr + 755178 755636 81 4.6

ryhB reads

sdhC reads