RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

ryhB - purA interactions in library 'Iron Limitation':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
ryhB purA sRNA CDS chr - 3580981 3581017 chr + 4404878 4404959 22 8.0
purA ryhB CDS sRNA chr + 4404778 4404858 chr - 3580923 3580986 43 8.1

ryhB reads

purA reads