RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

ryhB - gltB.5UTR interactions in library 'Iron Limitation':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
ryhB gltB.5UTR sRNA 5UTR chr - 3580979 3581017 chr + 3354536 3354560 11 11.8
gltB.5UTR ryhB 5UTR sRNA chr + 3354509 3354562 chr - 3580924 3580988 26 4.2

ryhB reads

gltB.5UTR reads