RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

ryhB - dmsA.5UTR interactions in library 'Exponential Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
ryhB dmsA.5UTR sRNA 5UTR chr - 3580952 3581018 chr + 940881 940965 43 10.2
dmsA.5UTR ryhB 5UTR sRNA chr + 940821 941076 chr - 3580921 3581000 3619 585.4

ryhB reads

dmsA.5UTR reads