RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

ryhB - cirA.5UTR interactions in library 'Iron Limitation':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
ryhB cirA.5UTR sRNA 5UTR chr - 3580978 3581021 chr - 2246711 2246908 1218 3.7
cirA.5UTR ryhB 5UTR sRNA chr - 2246482 2246944 chr - 3580921 3581000 7074 8.3

ryhB reads

cirA.5UTR reads