RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

arcZ - ydfW.flxA.IGR interactions in library 'Iron Limitation':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
ydfW.flxA.IGR arcZ IGR sRNA chr - 1647077 1647536 chr + 3350624 3350698 60 4.3
arcZ ydfW.flxA.IGR sRNA IGR chr + 3350618 3350656 chr - 1647048 1647088 128 15.5

arcZ reads

ydfW.flxA.IGR reads